STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdam_00002783Uncharacterized protein. (268 aa)    
Predicted Functional Partners:
pdam_00016405
6-phosphofructokinase; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade "E" sub-subfamily.
  
 
 0.981
pdam_00000774
6PF2K domain-containing protein.
    
 0.969
pdam_00011133
Triosephosphate isomerase.
  
 0.969
pdam_00002118
Uncharacterized protein.
   
 0.932
pdam_00010781
Phosphotransferase.
   
 0.932
pdam_00001316
Uncharacterized protein.
     
 0.906
pdam_00013453
Uncharacterized protein.
     
  0.900
pdam_00016763
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
 0.893
pdam_00005476
Phosphoglycerate kinase.
   
 0.849
pdam_00001141
Uncharacterized protein.
   
 0.849
Your Current Organism:
Pocillopora damicornis
NCBI taxonomy Id: 46731
Other names: P. damicornis, Pocillopora caespitosa laysanensis, Pocillopora damicornis laysanensis, cauliflower coral, lace coral
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