STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdam_00012419PDZ domain-containing protein. (432 aa)    
Predicted Functional Partners:
pdam_00007333
RING-type domain-containing protein.
    
 0.952
pdam_00005308
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
    
 0.938
pdam_00015374
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
    
 0.938
pdam_00023684
Uncharacterized protein.
    
 0.922
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 0.779
pdam_00005337
Uncharacterized protein.
     
 0.777
pdam_00011375
Uncharacterized protein.
    
 0.722
pdam_00001743
AB hydrolase-1 domain-containing protein.
  
 
 0.691
pdam_00019355
PCI domain-containing protein.
    
 0.669
pdam_00002231
SCP2 domain-containing protein.
   
 0.655
Your Current Organism:
Pocillopora damicornis
NCBI taxonomy Id: 46731
Other names: P. damicornis, Pocillopora caespitosa laysanensis, Pocillopora damicornis laysanensis, cauliflower coral, lace coral
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