STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdam_00012427RAWUL domain-containing protein. (294 aa)    
Predicted Functional Partners:
pdam_00003154
RING-type domain-containing protein.
    
 0.823
pdam_00018390
Uncharacterized protein.
    
 0.803
pdam_00003303
RanBP2-type domain-containing protein.
    
 0.699
pdam_00009403
Uncharacterized protein.
   
 0.672
pdam_00012773
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.
    
 0.609
pdam_00010922
Chromo domain-containing protein.
    
 0.530
pdam_00000716
Chromo domain-containing protein.
    
 0.530
pdam_00009135
Protein kinase domain-containing protein.
    
  0.530
pdam_00016694
Uncharacterized protein.
    
 0.530
pdam_00010170
SAM domain-containing protein.
    
 0.527
Your Current Organism:
Pocillopora damicornis
NCBI taxonomy Id: 46731
Other names: P. damicornis, Pocillopora caespitosa laysanensis, Pocillopora damicornis laysanensis, cauliflower coral, lace coral
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.