STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdam_00014496P-type domain-containing protein; Belongs to the glycosyl hydrolase 31 family. (926 aa)    
Predicted Functional Partners:
pdam_00018058
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
    
 0.958
pdam_00006209
Aamy domain-containing protein.
  
 
 0.950
pdam_00017969
Aamy domain-containing protein.
    
 0.937
pdam_00002118
Uncharacterized protein.
   
 
 0.917
pdam_00010781
Phosphotransferase.
   
 
 0.917
pdam_00001159
Uncharacterized protein.
  
  
 
0.905
pdam_00013453
Uncharacterized protein.
    
  0.900
pdam_00007489
Uncharacterized protein.
     
 0.649
pdam_00009002
PRKCSH_1 domain-containing protein.
   
 0.602
pdam_00002283
EF-hand domain-containing protein.
 
 
 0.602
Your Current Organism:
Pocillopora damicornis
NCBI taxonomy Id: 46731
Other names: P. damicornis, Pocillopora caespitosa laysanensis, Pocillopora damicornis laysanensis, cauliflower coral, lace coral
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