STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdam_00002200HEM4 domain-containing protein. (264 aa)    
Predicted Functional Partners:
pdam_00007985
Porphobil_deam domain-containing protein.
  
 0.996
pdam_00015997
Uncharacterized protein; Belongs to the ALAD family.
  
 0.989
pdam_00012249
Uncharacterized protein.
  
 
 0.928
pdam_00003043
Uncharacterized protein.
  
 
 0.857
pdam_00011233
Uncharacterized protein; Belongs to the ferrochelatase family.
  
  
 0.820
pdam_00006301
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
  
  
 0.818
pdam_00013986
Uncharacterized protein.
     
 0.803
pdam_00015858
PRA-CH domain-containing protein.
  
  
 0.788
pdam_00011314
Uncharacterized protein.
  
  
 0.780
pdam_00005081
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
     
 0.765
Your Current Organism:
Pocillopora damicornis
NCBI taxonomy Id: 46731
Other names: P. damicornis, Pocillopora caespitosa laysanensis, Pocillopora damicornis laysanensis, cauliflower coral, lace coral
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.