STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdam_00002149Uncharacterized protein. (1049 aa)    
Predicted Functional Partners:
pdam_00006213
Uncharacterized protein.
    
 0.580
pdam_00012813
Uncharacterized protein.
    
 0.549
pdam_00004295
Uncharacterized protein.
    
0.528
pdam_00002603
Uncharacterized protein.
    
 0.528
pdam_00014746
Uncharacterized protein.
    
 
0.459
pdam_00008042
Uncharacterized protein.
    
 
 0.459
pdam_00006805
Uncharacterized protein.
    
 
 0.459
pdam_00012402
Uncharacterized protein.
    
 
 0.432
pdam_00020998
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
   
  0.423
pdam_00007679
Non-specific serine/threonine protein kinase.
    
 
 0.411
Your Current Organism:
Pocillopora damicornis
NCBI taxonomy Id: 46731
Other names: P. damicornis, Pocillopora caespitosa laysanensis, Pocillopora damicornis laysanensis, cauliflower coral, lace coral
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.