STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdam_000026651-alkyl-2-acetylglycerophosphocholine esterase. (424 aa)    
Predicted Functional Partners:
pdam_00008124
Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes.
     
 0.926
pdam_00004832
Uncharacterized protein.
     
 0.917
pdam_00004833
Uncharacterized protein.
     
 0.917
pdam_00003430
SGNH_hydro domain-containing protein.
     
 0.910
pdam_00002963
Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.902
pdam_00008872
Phospholipase A2.
     
 0.741
pdam_00017839
Phospholipase A2.
     
 0.741
pdam_00013322
Phospholipase A2.
     
 0.741
pdam_00003210
Uncharacterized protein.
     
 0.687
pdam_00001918
Phospholipase A(2).
     
 0.686
Your Current Organism:
Pocillopora damicornis
NCBI taxonomy Id: 46731
Other names: P. damicornis, Pocillopora caespitosa laysanensis, Pocillopora damicornis laysanensis, cauliflower coral, lace coral
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