STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdam_00004054Voltage-dependent L-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death; Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family. (1841 aa)    
Predicted Functional Partners:
pdam_00024123
Uncharacterized protein.
   
 0.987
pdam_00016318
GuKc domain-containing protein.
   
 0.814
pdam_00015755
GuKc domain-containing protein.
   
 0.694
pdam_00016360
VWFA domain-containing protein.
   
 0.656
pdam_00008241
VWFA domain-containing protein.
   
 0.656
pdam_00018680
Uncharacterized protein.
    
 0.639
pdam_00009305
Uncharacterized protein.
  
0.624
pdam_00008782
Uncharacterized protein.
  
0.620
pdam_00005737
WD_REPEATS_REGION domain-containing protein.
    
 0.614
pdam_00015319
WD_REPEATS_REGION domain-containing protein.
    
 0.613
Your Current Organism:
Pocillopora damicornis
NCBI taxonomy Id: 46731
Other names: P. damicornis, Pocillopora caespitosa laysanensis, Pocillopora damicornis laysanensis, cauliflower coral, lace coral
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.