STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdam_00022000TPR_REGION domain-containing protein. (850 aa)    
Predicted Functional Partners:
pdam_00009858
Uncharacterized protein.
    
 0.809
pdam_00007959
Uncharacterized protein.
    
 0.474
pdam_00023782
Uncharacterized protein.
    
 0.474
pdam_00010727
Uncharacterized protein.
    
 0.453
pdam_00005907
TPR_REGION domain-containing protein.
    
 0.449
pdam_00001602
WD_REPEATS_REGION domain-containing protein.
    
 0.447
pdam_00015958
APC1_C domain-containing protein.
    
 0.445
pdam_00015045
Uncharacterized protein.
    
 0.441
pdam_00010580
Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.441
pdam_00017461
ANAPC5 domain-containing protein.
    
 0.440
Your Current Organism:
Pocillopora damicornis
NCBI taxonomy Id: 46731
Other names: P. damicornis, Pocillopora caespitosa laysanensis, Pocillopora damicornis laysanensis, cauliflower coral, lace coral
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.