STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdam_00014123Lipase_GDSL domain-containing protein. (244 aa)    
Predicted Functional Partners:
pdam_00008884
Uncharacterized protein.
  
 0.994
pdam_00003398
Uncharacterized protein.
    
 0.772
pdam_00014065
Imidazole glycerol phosphate synthase hisHF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The glutaminase domain produces the ammonia necessary for the cyclase domain to produce IGP and AICAR from PRFAR. The ammonia is channeled to the active site of the cyclase domain. Belongs to the HisA/HisF family.
    
 0.734
pdam_00008075
Glutamine amidotransferase type-2 domain-containing protein.
   
 
  0.681
pdam_00013248
Glutamine amidotransferase type-1 domain-containing protein.
    
 0.671
pdam_00013249
Glutamine amidotransferase type-1 domain-containing protein.
    
 0.671
pdam_00018019
Glutamine synthetase.
    
 0.580
pdam_00013261
Glutamine synthetase.
    
 0.580
pdam_00012031
Uncharacterized protein.
    
 0.556
pdam_00012035
Uncharacterized protein.
    
 0.556
Your Current Organism:
Pocillopora damicornis
NCBI taxonomy Id: 46731
Other names: P. damicornis, Pocillopora caespitosa laysanensis, Pocillopora damicornis laysanensis, cauliflower coral, lace coral
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.