STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdam_00015090MFS domain-containing protein. (508 aa)    
Predicted Functional Partners:
pdam_00000280
Arf-GAP domain-containing protein.
      
 0.603
pdam_00019479
Uncharacterized protein.
 
 
    0.599
pdam_00008776
Uncharacterized protein.
      
 0.566
pdam_00022793
Uncharacterized protein.
 
 
    0.537
pdam_00002030
Uncharacterized protein.
      
 0.519
pdam_00009662
MFS_1_like domain-containing protein.
      
 0.461
pdam_00004939
Uncharacterized protein.
      
 0.459
pdam_00004965
Uncharacterized protein.
      
 0.459
pdam_00022581
Uncharacterized protein.
      
 0.432
pdam_00004972
MFS domain-containing protein.
  
  
0.412
Your Current Organism:
Pocillopora damicornis
NCBI taxonomy Id: 46731
Other names: P. damicornis, Pocillopora caespitosa laysanensis, Pocillopora damicornis laysanensis, cauliflower coral, lace coral
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.