STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdam_00012716Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family. (745 aa)    
Predicted Functional Partners:
pdam_00009049
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
 0.997
pdam_00005771
Citrate synthase; Belongs to the citrate synthase family.
  
 0.991
pdam_00001638
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
 0.986
pdam_00016812
ATP-citrate synthase; In the C-terminal section; belongs to the succinate/malate CoA ligase alpha subunit family.
  
 0.978
pdam_00014890
Transket_pyr domain-containing protein.
  
 
 0.977
pdam_00011310
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 
 0.961
pdam_00008890
Uncharacterized protein.
  
 0.952
pdam_00022586
Uncharacterized protein.
  
 0.952
pdam_00008889
Uncharacterized protein.
  
 0.952
pdam_00022585
Uncharacterized protein.
  
 0.952
Your Current Organism:
Pocillopora damicornis
NCBI taxonomy Id: 46731
Other names: P. damicornis, Pocillopora caespitosa laysanensis, Pocillopora damicornis laysanensis, cauliflower coral, lace coral
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.