STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdam_00013327Uncharacterized protein. (201 aa)    
Predicted Functional Partners:
pdam_00000704
Uncharacterized protein.
   
0.999
pdam_00019664
Uncharacterized protein.
    
 
 0.997
pdam_00002396
Uncharacterized protein; Belongs to the AAA ATPase family.
   
 0.990
pdam_00011168
Uncharacterized protein.
    
 0.975
pdam_00007260
Uncharacterized protein.
 
 
 0.969
pdam_00003991
Uncharacterized protein.
   
0.966
pdam_00012990
Uncharacterized protein.
   
 
 0.958
pdam_00016923
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.910
pdam_00017024
Uncharacterized protein.
  
  
 
0.902
pdam_00018485
MIT domain-containing protein.
    
 
 0.872
Your Current Organism:
Pocillopora damicornis
NCBI taxonomy Id: 46731
Other names: P. damicornis, Pocillopora caespitosa laysanensis, Pocillopora damicornis laysanensis, cauliflower coral, lace coral
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.