STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdam_00015910Uncharacterized protein. (1075 aa)    
Predicted Functional Partners:
pdam_00010361
A_deaminase domain-containing protein.
      
 0.681
pdam_00012679
Glutamine amidotransferase type-2 domain-containing protein.
   
  
 0.584
pdam_00010729
Uncharacterized protein.
    
 
 0.578
pdam_00017463
Uncharacterized protein.
    
 0.532
pdam_00019053
Uncharacterized protein.
      
 0.457
pdam_00006030
Uncharacterized protein.
    
   0.443
pdam_00019796
HD domain-containing protein.
   
 
 0.413
pdam_00020971
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
   
  
 0.413
pdam_00020799
Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.
      
 0.407
pdam_00002942
Uncharacterized protein.
    
 
 0.400
Your Current Organism:
Pocillopora damicornis
NCBI taxonomy Id: 46731
Other names: P. damicornis, Pocillopora caespitosa laysanensis, Pocillopora damicornis laysanensis, cauliflower coral, lace coral
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