STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdam_00010780acidPPc domain-containing protein. (288 aa)    
Predicted Functional Partners:
pdam_00004794
O-acyltransferase.
    
 0.939
pdam_00019166
Uncharacterized protein.
     
 0.930
pdam_00002963
Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.924
pdam_00018362
LNS2 domain-containing protein.
    
 0.922
pdam_00007360
Uncharacterized protein.
    
 0.922
pdam_00010068
DAGKc domain-containing protein.
    
 0.920
pdam_00011665
Uncharacterized protein.
    
 0.912
pdam_00001120
TLC domain-containing protein.
    
 0.912
pdam_00002228
acidPPc domain-containing protein.
  
 
 
0.911
pdam_00005082
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
     
 0.910
Your Current Organism:
Pocillopora damicornis
NCBI taxonomy Id: 46731
Other names: P. damicornis, Pocillopora caespitosa laysanensis, Pocillopora damicornis laysanensis, cauliflower coral, lace coral
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.