STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdam_00020384Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. (511 aa)    
Predicted Functional Partners:
pdam_00019040
PlsC domain-containing protein.
 
    
 0.863
pdam_00009755
Uncharacterized protein.
  
 
 0.571
pdam_00016312
Carrier domain-containing protein.
  
 
 0.571
pdam_00010751
PKS_AT domain-containing protein.
  
 
 0.571
pdam_00010753
Carrier domain-containing protein.
  
 
 0.571
pdam_00010747
Carrier domain-containing protein.
  
 
 0.571
pdam_00017368
Uncharacterized protein.
      
 0.522
pdam_00022099
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
  
 0.496
pdam_00011375
Uncharacterized protein.
     
 0.493
pdam_00013783
M20_dimer domain-containing protein.
 
      0.493
Your Current Organism:
Pocillopora damicornis
NCBI taxonomy Id: 46731
Other names: P. damicornis, Pocillopora caespitosa laysanensis, Pocillopora damicornis laysanensis, cauliflower coral, lace coral
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