STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdam_00007293Uncharacterized protein. (79 aa)    
Predicted Functional Partners:
pdam_00013689
PRELI/MSF1 domain-containing protein.
    
 0.999
pdam_00002533
PRELI/MSF1 domain-containing protein.
    
 0.987
pdam_00022072
Uncharacterized protein.
      
 0.595
pdam_00013013
Phosphatidate cytidylyltransferase, mitochondrial; Catalyzes the formation of CDP-diacylglycerol (CDP-DAG) from phosphatidic acid (PA) in the mitochondrial inner membrane. Required for the biosynthesis of the dimeric phospholipid cardiolipin, which stabilizes supercomplexes of the mitochondrial respiratory chain in the mitochondrial inner membrane.
      
 0.573
pdam_00016123
Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family.
      
 0.561
pdam_00019488
START domain-containing protein.
      
 0.522
pdam_00007156
PUM-HD domain-containing protein.
    
   0.467
pdam_00009395
Uncharacterized protein.
      
 0.457
pdam_00007760
Uncharacterized protein.
    
 
 0.435
pdam_00017730
CHCH domain-containing protein.
     
 0.412
Your Current Organism:
Pocillopora damicornis
NCBI taxonomy Id: 46731
Other names: P. damicornis, Pocillopora caespitosa laysanensis, Pocillopora damicornis laysanensis, cauliflower coral, lace coral
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