STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdam_00007361G_PROTEIN_RECEP_F1_2 domain-containing protein. (333 aa)    
Predicted Functional Partners:
pdam_00018591
BHLH domain-containing protein.
  
     0.510
pdam_00003296
ETS domain-containing protein.
  
     0.507
pdam_00008282
C2 domain-containing protein.
  
  
  0.507
pdam_00017790
BHLH domain-containing protein.
  
     0.507
pdam_00014015
ETS domain-containing protein.
  
     0.506
pdam_00003295
ETS domain-containing protein.
  
     0.504
pdam_00017795
BHLH domain-containing protein.
  
     0.504
pdam_00015331
G_PROTEIN_RECEP_F1_2 domain-containing protein.
  
     0.498
pdam_00008652
BHLH domain-containing protein.
  
     0.497
pdam_00014012
ETS domain-containing protein.
  
     0.495
Your Current Organism:
Pocillopora damicornis
NCBI taxonomy Id: 46731
Other names: P. damicornis, Pocillopora caespitosa laysanensis, Pocillopora damicornis laysanensis, cauliflower coral, lace coral
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.