STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEE37747.1Peptidase M24; [J] COG0024 Methionine aminopeptidase. (381 aa)    
Predicted Functional Partners:
EEE37453.1
Asp/Glu racemase; [Q] COG3473 Maleate cis-trans isomerase.
 
     0.948
EEE38956.1
Diaminopropionate ammonia-lyase; [E] COG1171 Threonine dehydratase.
 
    0.939
soxA
Sarcosine oxidase alpha subunit; [R] COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; Belongs to the GcvT family.
  
 0.710
EEE34976.1
Sarcosine oxidase, alpha subunit family; [E] COG0404 Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
  
 0.710
RKLH11_6
Sarcosine oxidase, alpha subunit family; [E] COG0404 Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
  
 0.710
EEE37193.1
Polyamine ABC trasnporter, periplasmic polyamine-binding protein; [E] COG0687 Spermidine/putrescine-binding periplasmic protein.
 
    0.701
EEE37225.1
Glycine cleavage T-protein; [E] COG0665 Glycine/D-amino acid oxidases (deaminating); Belongs to the GcvT family.
  
 0.693
EEE37839.1
Glycine cleavage T-protein; [E] COG0665 Glycine/D-amino acid oxidases (deaminating); Belongs to the GcvT family.
  
 0.693
EEE36416.1
Glycine cleavage T-protein; [E] COG0665 Glycine/D-amino acid oxidases (deaminating); Belongs to the GcvT family.
  
 0.693
EEE39061.1
[E] COG0404 Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
  
 0.693
Your Current Organism:
Rhodobacteraceae bacterium KLH11
NCBI taxonomy Id: 467661
Other names: R. bacterium KLH11, Rhodobacteraceae bacterium str. KLH11, Rhodobacteraceae bacterium strain KLH11, Rhodobacterales bacterium KLH11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.