STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEE37845.1ABC transporter, substrate binding protein [spermidine/putrescine]; [E] COG0687 Spermidine/putrescine-binding periplasmic protein. (405 aa)    
Predicted Functional Partners:
EEE39215.1
Binding-protein-dependent transport systems inner membrane component; [KR] COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
 
 
 0.974
EEE37489.1
Binding-protein-dependent transport systems inner membrane component; [P] COG1178 ABC-type Fe3+ transport system, permease component.
 
 
 0.951
EEE36446.1
Spermidine/putrescine import ATP-binding protein PotA; [G] COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 
 0.888
EEE36481.1
Spermidine/putrescine import ATP-binding protein PotA; [E] COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 
 0.878
EEE36708.1
Short-chain dehydrogenase/reductase SDR; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
     0.850
EEE37569.1
Binding-protein-dependent transport systems inner membrane component; [E] COG1177 ABC-type spermidine/putrescine transport system, permease component II.
  
 
 0.838
EEE36935.1
Regulatory protein, GntR; [K] COG1802 Transcriptional regulators.
 
     0.807
EEE38176.1
Polysaccharide deacetylase family protein; [G] COG0726 Predicted xylanase/chitin deacetylase.
 
    0.787
potC
Spermidine/putrescine ABC transporter, permease protein PotC; [P] COG1178 ABC-type Fe3+ transport system, permease component.
  
 
 0.742
potI
Putrescine ABC transporter, permease protein; [P] COG4149 ABC-type molybdate transport system, permease component.
  
 
 0.742
Your Current Organism:
Rhodobacteraceae bacterium KLH11
NCBI taxonomy Id: 467661
Other names: R. bacterium KLH11, Rhodobacteraceae bacterium str. KLH11, Rhodobacteraceae bacterium strain KLH11, Rhodobacterales bacterium KLH11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.