STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEE37908.1[V] COG1132 ABC-type multidrug transport system, ATPase and permease components. (770 aa)    
Predicted Functional Partners:
EEE39125.1
Type I secretion membrane fusion protein, HlyD family; [M] COG0845 Membrane-fusion protein.
  
 0.949
EEE36276.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.913
EEE37964.1
Pe-pgrs family protein; [R] COG3291 FOG: PKD repeat.
 
     0.838
EEE37654.1
Type I secretion membrane fusion protein, HlyD family; [M] COG0845 Membrane-fusion protein.
  
 0.787
EEE36078.1
Type I secretion membrane fusion protein, HlyD; [M] COG0845 Membrane-fusion protein.
 
  
 0.783
EEE37714.1
Rb129; [M] COG0845 Membrane-fusion protein.
  
 0.782
EEE35844.1
Type I secretion membrane fusion protein, HlyD family; [V] COG1566 Multidrug resistance efflux pump.
  
 0.781
EEE35704.1
Type I secretion membrane fusion protein, HlyD; [M] COG0845 Membrane-fusion protein.
  
 0.752
EEE36018.1
Type I secretion membrane fusion protein, HlyD family; [M] COG0845 Membrane-fusion protein.
  
 0.744
EEE35358.1
Type I secretion membrane fusion protein, HlyD family; [M] COG0845 Membrane-fusion protein.
  
 0.736
Your Current Organism:
Rhodobacteraceae bacterium KLH11
NCBI taxonomy Id: 467661
Other names: R. bacterium KLH11, Rhodobacteraceae bacterium str. KLH11, Rhodobacteraceae bacterium strain KLH11, Rhodobacterales bacterium KLH11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.