STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RKLH11_2ATPase, AAA family; [R] COG0714 MoxR-like ATPases. (281 aa)    
Predicted Functional Partners:
EEE38837.1
VWA containing CoxE family protein; [S] COG3825 Uncharacterized protein conserved in bacteria.
 
    0.926
EEE38655.1
Hypothetical protein.
       0.773
dksA
RNA polymerase-binding protein DksA; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters.
       0.687
EEE36567.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
       0.668
EEE36875.1
[KR] COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
       0.650
EEE37428.1
[E] COG1982 Arginine/lysine/ornithine decarboxylases.
   
 
 0.574
EEE39192.1
Monooxygenase, FAD-binding; [HC] COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
       0.529
cobT_1
Cobaltochelatase, CobT subunit; [H] COG4547 Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase).
    
 0.523
EEE37829.1
[I] COG1960 Acyl-CoA dehydrogenases.
  
     0.464
EEE36403.1
[I] COG1960 Acyl-CoA dehydrogenases.
  
     0.464
Your Current Organism:
Rhodobacteraceae bacterium KLH11
NCBI taxonomy Id: 467661
Other names: R. bacterium KLH11, Rhodobacteraceae bacterium str. KLH11, Rhodobacteraceae bacterium strain KLH11, Rhodobacterales bacterium KLH11
Server load: high (84%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.