Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEE36348.1 | EEE38601.1 | RKLH11_181 | RKLH11_2444 | Hypothetical protein. | Conserved hypothetical protein; [S] COG5373 Predicted membrane protein. | 0.611 |
EEE36656.1 | EEE36685.1 | RKLH11_489 | RKLH11_518 | Conserved hypothetical protein TIGR01620; [S] COG3768 Predicted membrane protein. | Amino acid regulated cytosolic protein; [R] COG3106 Predicted ATPase. | 0.996 |
EEE36656.1 | EEE38601.1 | RKLH11_489 | RKLH11_2444 | Conserved hypothetical protein TIGR01620; [S] COG3768 Predicted membrane protein. | Conserved hypothetical protein; [S] COG5373 Predicted membrane protein. | 0.425 |
EEE36685.1 | EEE36656.1 | RKLH11_518 | RKLH11_489 | Amino acid regulated cytosolic protein; [R] COG3106 Predicted ATPase. | Conserved hypothetical protein TIGR01620; [S] COG3768 Predicted membrane protein. | 0.996 |
EEE36685.1 | EEE38601.1 | RKLH11_518 | RKLH11_2444 | Amino acid regulated cytosolic protein; [R] COG3106 Predicted ATPase. | Conserved hypothetical protein; [S] COG5373 Predicted membrane protein. | 0.425 |
EEE38545.1 | EEE38601.1 | RKLH11_2387 | RKLH11_2444 | Hypothetical protein; [S] COG5528 Predicted integral membrane protein. | Conserved hypothetical protein; [S] COG5373 Predicted membrane protein. | 0.544 |
EEE38601.1 | EEE36348.1 | RKLH11_2444 | RKLH11_181 | Conserved hypothetical protein; [S] COG5373 Predicted membrane protein. | Hypothetical protein. | 0.611 |
EEE38601.1 | EEE36656.1 | RKLH11_2444 | RKLH11_489 | Conserved hypothetical protein; [S] COG5373 Predicted membrane protein. | Conserved hypothetical protein TIGR01620; [S] COG3768 Predicted membrane protein. | 0.425 |
EEE38601.1 | EEE36685.1 | RKLH11_2444 | RKLH11_518 | Conserved hypothetical protein; [S] COG5373 Predicted membrane protein. | Amino acid regulated cytosolic protein; [R] COG3106 Predicted ATPase. | 0.425 |
EEE38601.1 | EEE38545.1 | RKLH11_2444 | RKLH11_2387 | Conserved hypothetical protein; [S] COG5373 Predicted membrane protein. | Hypothetical protein; [S] COG5528 Predicted integral membrane protein. | 0.544 |
EEE38601.1 | ileS | RKLH11_2444 | RKLH11_473 | Conserved hypothetical protein; [S] COG5373 Predicted membrane protein. | isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily. | 0.522 |
ileS | EEE38601.1 | RKLH11_473 | RKLH11_2444 | isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily. | Conserved hypothetical protein; [S] COG5373 Predicted membrane protein. | 0.522 |