STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cobT_1Cobaltochelatase, CobT subunit; [H] COG4547 Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase). (625 aa)    
Predicted Functional Partners:
cobS_1
Cobaltochelatase, CobS subunit; [R] COG5271 AAA ATPase containing von Willebrand factor type A (vWA) domain.
 
 
 0.996
cobN
Cobaltochelatase, CobN subunit; [H] COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatases.
     
 0.896
EEE37323.1
ATP:cob(I)alamin adenosyltransferase; [S] COG2096 Uncharacterized conserved protein; Belongs to the Cob(I)alamin adenosyltransferase family.
    
  0.842
EEE39205.1
DnaJ domain protein; [O] COG2214 DnaJ-class molecular chaperone.
 
     0.744
EEE36797.1
GcrA cell cycle regulator; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.725
atpF
ATP synthase F0, B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
     0.661
EEE37253.1
[L] COG2927 DNA polymerase III, chi subunit.
  
     0.617
EEE38119.1
ATP12 ATPase; [O] COG5387 Chaperone required for the assembly of the mitochondrial F1-ATPase.
  
     0.608
EEE39229.1
[S] COG5465 Uncharacterized conserved protein.
  
     0.603
atpF-2
ATP synthase F0, B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
     0.591
Your Current Organism:
Rhodobacteraceae bacterium KLH11
NCBI taxonomy Id: 467661
Other names: R. bacterium KLH11, Rhodobacteraceae bacterium str. KLH11, Rhodobacteraceae bacterium strain KLH11, Rhodobacterales bacterium KLH11
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.