STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEE35602.1Extracellular solute-binding protein, family 1; [G] COG1653 ABC-type sugar transport system, periplasmic component. (419 aa)    
Predicted Functional Partners:
EEE36027.1
Binding-protein-dependent transport systems inner membrane component; [G] COG0395 ABC-type sugar transport system, permease component.
 
  0.984
EEE36022.1
Binding-protein-dependent transport systems inner membrane component; [G] COG4209 ABC-type polysaccharide transport system, permease component.
 
  0.980
mltK
ATP-binding component of ABC mannitol transporter; [G] COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
  0.932
ugpE
ABC-type transporter, permease component: CUT1 family; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
  
 0.872
EEE38530.1
Binding-protein-dependent transport systems inner membrane component; [G] COG0395 ABC-type sugar transport system, permease component; overlaps another CDS with the same product name.
  
  0.868
bgaT
[G] COG1874 Beta-galactosidase.
 
   
 0.851
thuG
ABC transporter, membrane spanning protein [trehalose/maltose]; [G] COG0395 ABC-type sugar transport system, permease component.
  
 0.847
EEE35710.1
Binding-protein-dependent transport systems inner membrane component; [G] COG0395 ABC-type sugar transport system, permease component.
  
 0.847
EEE35239.1
[G] COG0395 ABC-type sugar transport system, permease component.
  
 0.847
EEE35561.1
Transcriptional regulator, IclR family; [K] COG0583 Transcriptional regulator.
 
    0.837
Your Current Organism:
Rhodobacteraceae bacterium KLH11
NCBI taxonomy Id: 467661
Other names: R. bacterium KLH11, Rhodobacteraceae bacterium str. KLH11, Rhodobacteraceae bacterium strain KLH11, Rhodobacterales bacterium KLH11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.