STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tetATetracycline resistance protein; [GEPR] COG0477 Permeases of the major facilitator superfamily. (401 aa)    
Predicted Functional Partners:
EEE35705.1
Hypothetical protein.
       0.773
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
 
      0.644
EEE35603.1
[EH] COG0147 Anthranilate/para-aminobenzoate synthases component I.
    
  0.533
soxA
Sarcosine oxidase alpha subunit; [R] COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; Belongs to the GcvT family.
  
    0.511
EEE35762.1
Hypothetical protein; [E] COG4583 Sarcosine oxidase gamma subunit.
       0.506
EEE35789.1
[E] COG4311 Sarcosine oxidase delta subunit.
       0.506
EEE35592.1
Sarcosine oxidase subunit beta; [E] COG0665 Glycine/D-amino acid oxidases (deaminating).
       0.482
Your Current Organism:
Rhodobacteraceae bacterium KLH11
NCBI taxonomy Id: 467661
Other names: R. bacterium KLH11, Rhodobacteraceae bacterium str. KLH11, Rhodobacteraceae bacterium strain KLH11, Rhodobacterales bacterium KLH11
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.