STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEE35944.1Rhs element Vgr protein; [S] COG3501 Uncharacterized protein conserved in bacteria. (213 aa)    
Predicted Functional Partners:
EEE35766.1
Conserved hypothetical protein; [R] COG3500 Phage protein D.
  
  0.969
EEE35748.1
Conserved hypothetical phage tail region protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
  
 0.959
EEE35837.1
[S] COG1652 Uncharacterized protein containing LysM domain.
 
    0.956
EEE35976.1
Conserved hypothetical phage tail region protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
  
 0.938
EEE35992.1
[R] COG3628 Phage baseplate assembly protein W.
 
  
 0.930
EEE35848.1
Secreted protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.928
EEE36132.1
[R] COG3497 Phage tail sheath protein FI.
 
   
 0.923
EEE35910.1
[S] COG4104 Uncharacterized conserved protein.
 
   
 0.911
EEE35926.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
  
  0.822
EEE35855.1
[O] COG0464 ATPases of the AAA+ class.
 
     0.817
Your Current Organism:
Rhodobacteraceae bacterium KLH11
NCBI taxonomy Id: 467661
Other names: R. bacterium KLH11, Rhodobacteraceae bacterium str. KLH11, Rhodobacteraceae bacterium strain KLH11, Rhodobacterales bacterium KLH11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.