STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEE34960.1Ammonium transporter family protein; [P] COG0004 Ammonia permease. (457 aa)    
Predicted Functional Partners:
EEE37144.1
Nitrogen regulatory protein P-II; [J] COG0223 Methionyl-tRNA formyltransferase; Belongs to the P(II) protein family.
 0.990
EEE37631.1
[E] COG0347 Nitrogen regulatory protein PII; Belongs to the P(II) protein family.
 0.985
EEE37229.1
[E] COG0070 Glutamate synthase domain 3.
 
  
 0.782
EEE34981.1
Conserved hypothetical protein.
       0.771
EEE35009.1
FwdC/FmdC family protein; [C] COG2218 Formylmethanofuran dehydrogenase subunit C.
 
  
 0.747
EEE35002.1
Glutamate synthase family protein; [F] COG0516 IMP dehydrogenase/GMP reductase.
 
   
 0.709
EEE35012.1
[E] COG0404 Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
 
     0.707
EEE35013.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.703
EEE34994.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.698
EEE35029.1
Putative class II glutamine amidotransferase; [F] COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase.
 
  
 0.686
Your Current Organism:
Rhodobacteraceae bacterium KLH11
NCBI taxonomy Id: 467661
Other names: R. bacterium KLH11, Rhodobacteraceae bacterium str. KLH11, Rhodobacteraceae bacterium strain KLH11, Rhodobacterales bacterium KLH11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.