STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEE35334.1Type I secretion target repeat protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (873 aa)    
Predicted Functional Partners:
EEE35205.1
[M] COG1215 Glycosyltransferases, probably involved in cell wall biogenesis.
 
 
 0.824
EEE36555.1
Type I secretion target repeat protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  0.814
EEE35509.1
GDP-mannose 6-dehydrogenase; [M] COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase.
 
    0.804
EEE38248.1
Conserved hypothetical protein.
 
  0.797
EEE36140.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
  0.742
EEE36364.1
Allergen V5/Tpx-1 family protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
 
 0.676
EEE35104.1
Animal heme peroxidase; [Q] COG2931 RTX toxins and related Ca2+-binding proteins.
 
 
0.674
EEE37667.1
Hemolysin-type calcium-binding protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
 
0.663
EEE35181.1
Exotoxin translocation ATP-binding protein PaxB; [V] COG1132 ABC-type multidrug transport system, ATPase and permease components; overlaps another CDS with the same product name.
 
 
 0.662
EEE35175.1
Calcium binding hemolysin protein, putative; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
 
0.659
Your Current Organism:
Rhodobacteraceae bacterium KLH11
NCBI taxonomy Id: 467661
Other names: R. bacterium KLH11, Rhodobacteraceae bacterium str. KLH11, Rhodobacteraceae bacterium strain KLH11, Rhodobacterales bacterium KLH11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.