STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEE35100.1Bacterial type II and III secretion system protein; [NU] COG1450 Type II secretory pathway, component PulD; Belongs to the bacterial secretin family. (499 aa)    
Predicted Functional Partners:
EEE35427.1
Bacterial type II secretion system protein F domain; [NU] COG1459 Type II secretory pathway, component PulF.
 
  
 0.825
EEE35110.1
Hypothetical protein; [NU] COG1459 Type II secretory pathway, component PulF.
 
  
 0.822
EEE35048.1
Hypothetical protein.
       0.773
EEE35053.1
Hypothetical protein.
       0.773
EEE35541.1
FHA domain containing protein; [LKJ] COG0513 Superfamily II DNA and RNA helicases.
  
  
 0.700
EEE35037.1
Hypothetical protein.
       0.605
EEE35104.1
Animal heme peroxidase; [Q] COG2931 RTX toxins and related Ca2+-binding proteins.
  
  
 0.475
EEE37431.1
Surface presentation of antigens protein.
  
  
 0.405
EEE38234.1
Surface presentation of antigens protein; [NU] COG1886 Flagellar motor switch/type III secretory pathway protein.
  
  
 0.405
EEE39146.1
Adenylate cyclase Cya3; [R] COG0457 FOG: TPR repeat.
  
 
 0.401
Your Current Organism:
Rhodobacteraceae bacterium KLH11
NCBI taxonomy Id: 467661
Other names: R. bacterium KLH11, Rhodobacteraceae bacterium str. KLH11, Rhodobacteraceae bacterium strain KLH11, Rhodobacterales bacterium KLH11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.