STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEE35163.1Type II secretion system protein E; [NU] COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT. (337 aa)    
Predicted Functional Partners:
EEE36716.1
Type II/IV secretion system protein, TadC subfamily; [NU] COG2064 Flp pilus assembly protein TadC.
 
  
 0.931
EEE38246.1
Type II/IV secretion system protein, TadC subfamily; [NU] COG2064 Flp pilus assembly protein TadC.
 
  
 0.912
EEE35214.1
Hypothetical protein; [U] COG3451 Type IV secretory pathway, VirB4 components; putative probable conjugal transfer protein TrbE.
 
  
 0.891
EEE35070.1
Hypothetical protein; [U] COG3505 Type IV secretory pathway, VirD4 components.
 
   
 0.866
EEE35160.1
Hypothetical protein; [U] COG3504 Type IV secretory pathway, VirB9 components.
 
  
 0.861
EEE37669.1
Bacterial type II/III secretion system protein; [NU] COG1450 Type II secretory pathway, component PulD; Belongs to the bacterial secretin family.
  
 0.848
cpaB
[U] COG3745 Flp pilus assembly protein CpaB.
 
  
 0.844
EEE37177.1
Response regulator receiver protein; [D] COG0455 ATPases involved in chromosome partitioning.
 
  
 0.827
EEE35478.1
Conjugal transfer protein TrbI; [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
 
  
 0.801
EEE35156.1
Putative VirB4 protein; [U] COG3451 Type IV secretory pathway, VirB4 components.
 
  
 0.753
Your Current Organism:
Rhodobacteraceae bacterium KLH11
NCBI taxonomy Id: 467661
Other names: R. bacterium KLH11, Rhodobacteraceae bacterium str. KLH11, Rhodobacteraceae bacterium strain KLH11, Rhodobacterales bacterium KLH11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.