STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEE36655.1Transglycosylase, Slt family; [M] COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains). (289 aa)    
Predicted Functional Partners:
EEE37596.1
Conserved hypothetical protein.
 
    0.596
fliI
H+-transporting two-sector ATPase, flagellum-specific; [C] COG1155 Archaeal/vacuolar-type H+-ATPase subunit A.
 
  
 0.574
flgF
[N] COG4786 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
 
   0.488
lon
ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.
  
     0.488
EEE36961.1
[NU] COG1677 Flagellar hook-basal body protein.
  
  
 0.484
flgG
[N] COG1558 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
 
   0.474
EEE37780.1
Flagellar motor protein; [D] COG1196 Chromosome segregation ATPases.
 
  
 0.449
flgE
[N] COG4787 Flagellar basal body rod protein.
  
    0.445
EEE38457.1
N-acetylmuramoyl-L-alanine amidase, family 3; [M] COG0860 N-acetylmuramoyl-L-alanine amidase.
 
  
 0.442
EEE35571.1
Hydrolase, carbon-nitrogen family; [R] COG0388 Predicted amidohydrolase.
   
    0.438
Your Current Organism:
Rhodobacteraceae bacterium KLH11
NCBI taxonomy Id: 467661
Other names: R. bacterium KLH11, Rhodobacteraceae bacterium str. KLH11, Rhodobacteraceae bacterium strain KLH11, Rhodobacterales bacterium KLH11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.