STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEE36685.1Amino acid regulated cytosolic protein; [R] COG3106 Predicted ATPase. (471 aa)    
Predicted Functional Partners:
EEE36656.1
Conserved hypothetical protein TIGR01620; [S] COG3768 Predicted membrane protein.
 
  
 0.996
EEE36849.1
Acetyltransferase, gnat family; [KR] COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
       0.835
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
       0.713
mepA
Peptidoglycan amidase MepA; [M] COG3770 Murein endopeptidase.
  
     0.644
EEE38349.1
dTDP-4-dehydrorhamnose reductase; [MG] COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
       0.569
EEE35952.1
[R] COG5342 Invasion protein B, involved in pathogenesis.
  
     0.506
gpt
Xanthine-guanine phosphoribosyltransferase; Acts on guanine, xanthine and to a lesser extent hypoxanthine; Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily.
  
     0.449
EEE35027.1
[R] COG5342 Invasion protein B, involved in pathogenesis.
  
     0.438
EEE38601.1
Conserved hypothetical protein; [S] COG5373 Predicted membrane protein.
       0.425
EEE38650.1
[C] COG0778 Nitroreductase.
  
     0.423
Your Current Organism:
Rhodobacteraceae bacterium KLH11
NCBI taxonomy Id: 467661
Other names: R. bacterium KLH11, Rhodobacteraceae bacterium str. KLH11, Rhodobacteraceae bacterium strain KLH11, Rhodobacterales bacterium KLH11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.