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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RKLH11_6Sarcosine oxidase, alpha subunit family; [E] COG0404 Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family. (1004 aa)    
Predicted Functional Partners:
EEE37387.1
Sarcosine oxidase, delta subunit, heterotetrameric; [E] COG4311 Sarcosine oxidase delta subunit.
 
 0.999
EEE38257.1
[E] COG4583 Sarcosine oxidase gamma subunit.
 
 0.999
EEE37303.1
Sarcosine oxidase subunit beta; [E] COG0665 Glycine/D-amino acid oxidases (deaminating).
 
 0.997
EEE35789.1
[E] COG4311 Sarcosine oxidase delta subunit.
 
 0.997
soxD
[E] COG4311 Sarcosine oxidase delta subunit.
 
 0.996
gcvP_1
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
 0.995
gcvP_2
[E] COG0403 Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain.
  
 0.995
EEE35592.1
Sarcosine oxidase subunit beta; [E] COG0665 Glycine/D-amino acid oxidases (deaminating).
 
 0.994
EEE35018.1
Sarcosine oxidase, beta subunit family; [E] COG0665 Glycine/D-amino acid oxidases (deaminating).
 
 0.994
EEE35762.1
Hypothetical protein; [E] COG4583 Sarcosine oxidase gamma subunit.
 
 0.992
Your Current Organism:
Rhodobacteraceae bacterium KLH11
NCBI taxonomy Id: 467661
Other names: R. bacterium KLH11, Rhodobacteraceae bacterium str. KLH11, Rhodobacteraceae bacterium strain KLH11, Rhodobacterales bacterium KLH11
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