STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gph_2Phosphoglycolate phosphatase, bacterial; [R] COG0546 Predicted phosphatases. (223 aa)    
Predicted Functional Partners:
EEE38183.1
HAD-superfamily hydrolase, subfamily IA, variant 1; [R] COG0637 Predicted phosphatase/phosphohexomutase.
  
  
 
0.758
EEE37167.1
[R] COG3178 Predicted phosphotransferase related to Ser/Thr protein kinases.
 
  
 0.751
EEE38497.1
Aminotransferase, DegT/DnrJ/EryC1/StrS family; [M] COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.
    
  0.748
EEE36763.1
HAD-superfamily hydrolase, subfamily IA, variant 1 family protein; [R] COG0546 Predicted phosphatases.
  
  
 
0.723
glcF
Glycolate oxidase, iron-sulfur subunit; [C] COG0247 Fe-S oxidoreductase.
    
 0.721
glcE
Glycolate oxidase, GlcE subunit; [C] COG0277 FAD/FMN-containing dehydrogenases.
    
 0.714
glmS
Glutamine-fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
    
  0.670
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
 
  0.663
ycdW
2-ketoacid reductase; [HE] COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases.
    
 0.628
serA_1
[CHR] COG1052 Lactate dehydrogenase and related dehydrogenases.
    
 0.628
Your Current Organism:
Rhodobacteraceae bacterium KLH11
NCBI taxonomy Id: 467661
Other names: R. bacterium KLH11, Rhodobacteraceae bacterium str. KLH11, Rhodobacteraceae bacterium strain KLH11, Rhodobacterales bacterium KLH11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.