STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RKLH11_65NLP/P60 family protein; [M] COG0791 Cell wall-associated hydrolases (invasion-associated proteins). (245 aa)    
Predicted Functional Partners:
EEE38247.1
Cytosol aminopeptidase family protein; [E] COG0260 Leucyl aminopeptidase; Belongs to the peptidase M17 family.
       0.858
EEE38457.1
N-acetylmuramoyl-L-alanine amidase, family 3; [M] COG0860 N-acetylmuramoyl-L-alanine amidase.
 
 
 0.781
EEE37090.1
beta-N-acetylhexosaminidase; [G] COG1472 Beta-glucosidase-related glycosidases.
 
  
 0.767
EEE37426.1
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; [V] COG3023 Negative regulator of beta-lactamase expression.
  
 
 0.742
EEE37359.1
Conserved hypothetical protein.
       0.739
EEE35259.1
LysM domain protein.
  
 
 0.728
mrdA
Penicillin-binding protein 2; [M] COG0768 Cell division protein FtsI/penicillin-binding protein 2.
    
 0.694
EEE37825.1
Penicillin-binding protein; [M] COG0744 Membrane carboxypeptidase (penicillin-binding protein).
    
 0.693
EEE36557.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.663
EEE37321.1
[V] COG1680 Beta-lactamase class C and other penicillin binding proteins.
  
 
 0.662
Your Current Organism:
Rhodobacteraceae bacterium KLH11
NCBI taxonomy Id: 467661
Other names: R. bacterium KLH11, Rhodobacteraceae bacterium str. KLH11, Rhodobacteraceae bacterium strain KLH11, Rhodobacterales bacterium KLH11
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