STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RKLH11_76Trap dicarboxylate transporter- dctm subunit; [GE] COG2610 H+/gluconate symporter and related permeases. (431 aa)    
Predicted Functional Partners:
EEE37671.1
Trap dicarboxylate transporter- dctp subunit; [G] COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
 
 0.853
EEE38379.1
4-hydroxyphenylpyruvate dioxygenase; [G] COG1082 Sugar phosphate isomerases/epimerases.
 
     0.849
EEE35443.1
Trap dicarboxylate transporter, dctp subunit; [Q] COG4663 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component.
 
 0.847
EEE37070.1
Trap dicarboxylate transporter, dctq subunit; [G] COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
 
 0.836
EEE38314.1
Tripartite ATP-independent periplasmic transporter, DctQ component; [G] COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
 
 0.832
EEE35907.1
Trap dicarboxylate transporter- dctp subunit; [G] COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
 
 0.832
EEE35486.1
Tripartite ATP-independent periplasmic transporter, DctQ component; [G] COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
 
 0.822
EEE36112.1
Trap dicarboxylate transporter, dctq subunit; [G] COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
 
 0.819
EEE36120.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
 0.794
EEE36067.1
Tripartite ATP-independent periplasmic transporter, DctQ component; [G] COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
 
  0.792
Your Current Organism:
Rhodobacteraceae bacterium KLH11
NCBI taxonomy Id: 467661
Other names: R. bacterium KLH11, Rhodobacteraceae bacterium str. KLH11, Rhodobacteraceae bacterium strain KLH11, Rhodobacterales bacterium KLH11
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