STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEE36951.1[R] COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family. (166 aa)    
Predicted Functional Partners:
EEE35967.1
Alkanal monooxygenase alpha chain; [C] COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases.
 
 
 0.771
bluB
cob(II)yrinic acid a,c-diamide reductase; [C] COG0778 Nitroreductase.
  
 
 0.747
ribF
Riboflavin biosynthesis protein RibF; [H] COG0196 FAD synthase; Belongs to the ribF family.
    
  0.723
EEE37338.1
Dihydropyrimidine dehydrogenase [NADP+]; [C] COG1145 Ferredoxin.
  
 
  0.708
ribE
[H] COG0307 Riboflavin synthase alpha chain.
    
  0.697
EEE37637.1
Luciferase family protein; [C] COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases.
 
 
 0.696
EEE35935.1
Hydrolase; [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
    0.607
EEE38184.1
Conserved hypothetical protein.
       0.562
EEE35537.1
Putative bacitracin synthetase 1 (BA1); [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins.
    
 0.559
cobT_2
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).
    
  0.558
Your Current Organism:
Rhodobacteraceae bacterium KLH11
NCBI taxonomy Id: 467661
Other names: R. bacterium KLH11, Rhodobacteraceae bacterium str. KLH11, Rhodobacteraceae bacterium strain KLH11, Rhodobacterales bacterium KLH11
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