STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEE37094.1Transcriptional regulator, MerR family; [K] COG0789 Predicted transcriptional regulators. (122 aa)    
Predicted Functional Partners:
EEE35206.1
Sensory box histidine kinase/response regulator; [T] COG0642 Signal transduction histidine kinase.
   
 0.780
EEE39145.1
Sensor histidine kinase/response regulator; [T] COG0642 Signal transduction histidine kinase.
   
 
 0.763
EEE37229.1
[E] COG0070 Glutamate synthase domain 3.
    
 0.730
EEE37004.1
Thioesterase family protein; [Q] COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism.
 
    0.730
EEE38107.1
Thioesterase family protein; [Q] COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism.
  
    0.723
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.698
EEE38139.1
Transcriptional regulator, MerR family; [K] COG0789 Predicted transcriptional regulators.
 
    
0.693
EEE37779.1
Mate efflux family protein; [V] COG0534 Na+-driven multidrug efflux pump.
     
 0.681
EEE37068.1
[O] COG2214 DnaJ-class molecular chaperone.
  
 
 0.680
EEE35453.1
Transcriptional regulator, AraC family; [K] COG2207 AraC-type DNA-binding domain-containing proteins.
   
 
 0.677
Your Current Organism:
Rhodobacteraceae bacterium KLH11
NCBI taxonomy Id: 467661
Other names: R. bacterium KLH11, Rhodobacteraceae bacterium str. KLH11, Rhodobacteraceae bacterium strain KLH11, Rhodobacterales bacterium KLH11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.