STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEE37110.1Extracellular ligand-binding receptor; [E] COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component. (393 aa)    
Predicted Functional Partners:
EEE37594.1
Branched-chain amino acid ABC transporter, ATP-binding protein; [G] COG1129 ABC-type sugar transport system, ATPase component.
 
 
 0.977
EEE38099.1
[E] COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.974
EEE37084.1
[E] COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.968
EEE38977.1
Branched-chain amino acid ABC transporter, ATP-binding protein; [G] COG1129 ABC-type sugar transport system, ATPase component.
 
 
 0.962
EEE36601.1
Branched-chain amino acid ABC transporter, permease protein; [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 
 
 0.935
EEE38790.1
[E] COG0559 Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.934
EEE37218.1
Branched-chain amino acid ABC transporter, permease protein; [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 
 
 0.919
EEE38696.1
Branched-chain amino acid ABC transporter, ATP-binding protein; [K] COG0583 Transcriptional regulator.
 
 
 0.912
EEE37826.1
Branched-chain amino acid ABC transporter, permease protein; [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 
 
 0.909
EEE38426.1
Branched-chain amino acid ABC transporter, ATP-binding protein; [G] COG1129 ABC-type sugar transport system, ATPase component.
 
 
 0.903
Your Current Organism:
Rhodobacteraceae bacterium KLH11
NCBI taxonomy Id: 467661
Other names: R. bacterium KLH11, Rhodobacteraceae bacterium str. KLH11, Rhodobacteraceae bacterium strain KLH11, Rhodobacterales bacterium KLH11
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