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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGO_0264Conserved hypothetical protein. (172 aa)    
Predicted Functional Partners:
nac
Transcriptional regulator, LysR family; Identified by match to protein family HMM PF00126; Belongs to the LysR transcriptional regulatory family.
       0.585
GnaT
Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.
   
  
 0.585
SGO_0091
Integral membrane protein; Identified by match to protein family HMM TIGR03061; match to protein family HMM TIGR03062.
      
 0.576
SGO_0356
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.576
SGO_0636
Conserved hypothetical protein; Identified by match to protein family HMM PF08930.
      
 0.576
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
      
 0.576
SGO_0834
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.576
SGO_1758
Putative transcriptional regulator; Identified by match to protein family HMM PF01381.
      
 0.576
ftcD
Glutamate formiminotransferase; Identified by match to protein family HMM PF02971; match to protein family HMM PF07837; match to protein family HMM TIGR02024.
      
 0.576
SGO_1603
Conserved hypothetical protein.
  
     0.467
Your Current Organism:
Streptococcus gordonii
NCBI taxonomy Id: 467705
Other names: S. gordonii str. Challis substr. CH1, Streptococcus gordonii ATCC 35105, Streptococcus gordonii str. Challis substr. CH1, Streptococcus gordonii str. Challis substr. DL1, Streptococcus gordonii str. Challis substr. V288
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.