degV protein (Streptococcus gordonii) - STRING interaction network

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Score

degV

DegV family fatty acid binding protein; Identified by match to protein family HMM PF02645; match to protein family HMM TIGR00762. (287 aa)

Predicted Functional Partners:

SGO_1735

0.958

SGO_1736

0.684

SGO_0355

0.556

rplM

0.514

rpsI

0.488

SGO_0356

0.482

SGO_0354

0.415

Your Current Organism:

Streptococcus gordonii

NCBI taxonomy Id: 467705
Other names: S. gordonii str. Challis substr. CH1, Streptococcus gordonii ATCC 35105, Streptococcus gordonii str. Challis substr. CH1, Streptococcus gordonii str. Challis substr. DL1, Streptococcus gordonii str. Challis substr. V288

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SGO_0354	SGO_0355	SGO_0354	SGO_0355	Membrane spanning protein; Identified by match to protein family HMM PF06081.	RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	0.582
SGO_0354	SGO_0356	SGO_0354	SGO_0356	Membrane spanning protein; Identified by match to protein family HMM PF06081.	Hypothetical protein; Identified by Glimmer2; putative.	0.525
SGO_0354	degV	SGO_0354	SGO_0357	Membrane spanning protein; Identified by match to protein family HMM PF06081.	DegV family fatty acid binding protein; Identified by match to protein family HMM PF02645; match to protein family HMM TIGR00762.	0.415
SGO_0355	SGO_0354	SGO_0355	SGO_0354	RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	Membrane spanning protein; Identified by match to protein family HMM PF06081.	0.582
SGO_0355	SGO_0356	SGO_0355	SGO_0356	RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	Hypothetical protein; Identified by Glimmer2; putative.	0.778
SGO_0355	degV	SGO_0355	SGO_0357	RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	DegV family fatty acid binding protein; Identified by match to protein family HMM PF02645; match to protein family HMM TIGR00762.	0.556
SGO_0355	rplM	SGO_0355	SGO_0358	RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.879
SGO_0355	rpsI	SGO_0355	SGO_0359	RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	Ribosomal protein S9; Identified by match to protein family HMM PF00380; Belongs to the universal ribosomal protein uS9 family.	0.538
SGO_0356	SGO_0354	SGO_0356	SGO_0354	Hypothetical protein; Identified by Glimmer2; putative.	Membrane spanning protein; Identified by match to protein family HMM PF06081.	0.525
SGO_0356	SGO_0355	SGO_0356	SGO_0355	Hypothetical protein; Identified by Glimmer2; putative.	RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	0.778
SGO_0356	degV	SGO_0356	SGO_0357	Hypothetical protein; Identified by Glimmer2; putative.	DegV family fatty acid binding protein; Identified by match to protein family HMM PF02645; match to protein family HMM TIGR00762.	0.482
SGO_1735	SGO_1736	SGO_1735	SGO_1736	Conserved domain protein; Identified by match to protein family HMM PF02734.	Alkaline shock protein; Identified by match to protein family HMM PF03780.	0.984
SGO_1735	degV	SGO_1735	SGO_0357	Conserved domain protein; Identified by match to protein family HMM PF02734.	DegV family fatty acid binding protein; Identified by match to protein family HMM PF02645; match to protein family HMM TIGR00762.	0.958
SGO_1736	SGO_1735	SGO_1736	SGO_1735	Alkaline shock protein; Identified by match to protein family HMM PF03780.	Conserved domain protein; Identified by match to protein family HMM PF02734.	0.984
SGO_1736	degV	SGO_1736	SGO_0357	Alkaline shock protein; Identified by match to protein family HMM PF03780.	DegV family fatty acid binding protein; Identified by match to protein family HMM PF02645; match to protein family HMM TIGR00762.	0.684
degV	SGO_0354	SGO_0357	SGO_0354	DegV family fatty acid binding protein; Identified by match to protein family HMM PF02645; match to protein family HMM TIGR00762.	Membrane spanning protein; Identified by match to protein family HMM PF06081.	0.415
degV	SGO_0355	SGO_0357	SGO_0355	DegV family fatty acid binding protein; Identified by match to protein family HMM PF02645; match to protein family HMM TIGR00762.	RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	0.556
degV	SGO_0356	SGO_0357	SGO_0356	DegV family fatty acid binding protein; Identified by match to protein family HMM PF02645; match to protein family HMM TIGR00762.	Hypothetical protein; Identified by Glimmer2; putative.	0.482
degV	SGO_1735	SGO_0357	SGO_1735	DegV family fatty acid binding protein; Identified by match to protein family HMM PF02645; match to protein family HMM TIGR00762.	Conserved domain protein; Identified by match to protein family HMM PF02734.	0.958
degV	SGO_1736	SGO_0357	SGO_1736	DegV family fatty acid binding protein; Identified by match to protein family HMM PF02645; match to protein family HMM TIGR00762.	Alkaline shock protein; Identified by match to protein family HMM PF03780.	0.684

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