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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rggTranscriptional regulator Rgg; Regulates the expression of glucosyltransferase (gtfG). (297 aa)    
Predicted Functional Partners:
rggC
Putative transcriptional regulator RggC; Identified by match to protein family HMM TIGR01716.
  
  
0.938
rggB
Putative transcriptional regulator RggB; Identified by match to protein family HMM PF01381; match to protein family HMM TIGR01716.
  
  
 
0.928
gtfG
Glucosyltransferase G; Identified by match to protein family HMM PF01473; match to protein family HMM PF02324.
     
 0.854
htpx
Heat shock protein; Identified by match to protein family HMM PF01435; Belongs to the peptidase M48B family.
  
  
 0.734
dsg
Putative permease; Identified by match to protein family HMM PF07690.
 
   
 0.709
SGO_1019
Glycosyl transferase; Identified by match to protein family HMM PF00535.
      
 0.670
rgp
Glycosyltransferase; Identified by match to protein family HMM PF00535.
      
 0.670
SGO_0064
Identified by match to protein family HMM PF01580.
 
   
 0.647
adcR
Repressor protein adcR; Identified by match to protein family HMM PF01022; match to protein family HMM PF01047.
  
 
 0.625
DivIB
Cell division protein DivIB; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.
      
 0.578
Your Current Organism:
Streptococcus gordonii
NCBI taxonomy Id: 467705
Other names: S. gordonii str. Challis substr. CH1, Streptococcus gordonii ATCC 35105, Streptococcus gordonii str. Challis substr. CH1, Streptococcus gordonii str. Challis substr. DL1, Streptococcus gordonii str. Challis substr. V288
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.