SGO_0534 protein (Streptococcus gordonii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

SGO_0534

Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. (168 aa)

Predicted Functional Partners:

SGO_0535

0.789

SGO_0533

0.788

SGO_0532

0.634

SGO_0531

0.473

Your Current Organism:

Streptococcus gordonii

NCBI taxonomy Id: 467705
Other names: S. gordonii str. Challis substr. CH1, Streptococcus gordonii ATCC 35105, Streptococcus gordonii str. Challis substr. CH1, Streptococcus gordonii str. Challis substr. DL1, Streptococcus gordonii str. Challis substr. V288

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
SGO_0531	SGO_0532	Membrane protein, putative; Identified by match to protein family HMM PF07099.	Identified by match to protein family HMM PF00860; match to protein family HMM PF00916.	0.576
SGO_0531	SGO_0533	Membrane protein, putative; Identified by match to protein family HMM PF07099.	Conserved hypothetical protein TIGR00150; Identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150.	0.497
SGO_0531	SGO_0534	Membrane protein, putative; Identified by match to protein family HMM PF07099.	Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.	0.473
SGO_0531	SGO_0535	Membrane protein, putative; Identified by match to protein family HMM PF07099.	Putative transcriptional regulator LytR; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350.	0.422
SGO_0532	SGO_0531	Identified by match to protein family HMM PF00860; match to protein family HMM PF00916.	Membrane protein, putative; Identified by match to protein family HMM PF07099.	0.576
SGO_0532	SGO_0533	Identified by match to protein family HMM PF00860; match to protein family HMM PF00916.	Conserved hypothetical protein TIGR00150; Identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150.	0.668
SGO_0532	SGO_0534	Identified by match to protein family HMM PF00860; match to protein family HMM PF00916.	Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.	0.634
SGO_0532	SGO_0535	Identified by match to protein family HMM PF00860; match to protein family HMM PF00916.	Putative transcriptional regulator LytR; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350.	0.584
SGO_0533	SGO_0531	Conserved hypothetical protein TIGR00150; Identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150.	Membrane protein, putative; Identified by match to protein family HMM PF07099.	0.497
SGO_0533	SGO_0532	Conserved hypothetical protein TIGR00150; Identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150.	Identified by match to protein family HMM PF00860; match to protein family HMM PF00916.	0.668
SGO_0533	SGO_0534	Conserved hypothetical protein TIGR00150; Identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150.	Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.	0.788
SGO_0533	SGO_0535	Conserved hypothetical protein TIGR00150; Identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150.	Putative transcriptional regulator LytR; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350.	0.737
SGO_0534	SGO_0531	Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.	Membrane protein, putative; Identified by match to protein family HMM PF07099.	0.473
SGO_0534	SGO_0532	Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.	Identified by match to protein family HMM PF00860; match to protein family HMM PF00916.	0.634
SGO_0534	SGO_0533	Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.	Conserved hypothetical protein TIGR00150; Identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150.	0.788
SGO_0534	SGO_0535	Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.	Putative transcriptional regulator LytR; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350.	0.789
SGO_0535	SGO_0531	Putative transcriptional regulator LytR; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350.	Membrane protein, putative; Identified by match to protein family HMM PF07099.	0.422
SGO_0535	SGO_0532	Putative transcriptional regulator LytR; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350.	Identified by match to protein family HMM PF00860; match to protein family HMM PF00916.	0.584
SGO_0535	SGO_0533	Putative transcriptional regulator LytR; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350.	Conserved hypothetical protein TIGR00150; Identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150.	0.737
SGO_0535	SGO_0534	Putative transcriptional regulator LytR; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350.	Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.	0.789

Server load: low (34%) [HD]

Permalink

Network

Neighborhood

Textmining

Cooccurrence

Experiments

Coexpression

Databases

Fusion

© STRING Consortium 2025

Credits

Access

Info

About