Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SGO_0579Amino acid ABC transporter ATP binding protein; Identified by match to protein family HMM PF00005. (247 aa)    
Predicted Functional Partners:
SGO_0578
Amino acid ABC transporter permease protein; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726.
 
 0.999
SGO_0580
Conserved hypothetical protein.
    
  0.970
SGO_0457
ABC transporter, substrate-binding protein SP0148; Identified by match to protein family HMM PF00497.
 
 0.954
SGO_0985
Amino acid ABC transporter, permease protein SP0711; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726.
 
 
 0.940
SGO_0984
Amino acid ABC transporter, permease protein SP0710; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726.
 
 
 0.924
SGO_1037
Glutamine ABC transporter permease and substrate binding protein; Identified by match to protein family HMM PF00497; match to protein family HMM PF00528; match to protein family HMM TIGR01726.
 
 0.922
SGO_1727
Amino acid ABC transporter, amino acid-binding/permease protein; Identified by match to protein family HMM PF00497; match to protein family HMM PF00528; match to protein family HMM TIGR01726.
 
 0.913
SGO_1290
ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
 
     
0.898
SGO_1750
ABC-type multidrug/protein/lipid transport system, ATPase component; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
 
     
0.892
trxB
Thioredoxin-disulfide reductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF01134; match to protein family HMM PF01266; match to protein family HMM PF03486; match to protein family HMM PF07992; match to protein family HMM TIGR01292.
 
     0.698
Your Current Organism:
Streptococcus gordonii
NCBI taxonomy Id: 467705
Other names: S. gordonii str. Challis substr. CH1, Streptococcus gordonii ATCC 35105, Streptococcus gordonii str. Challis substr. CH1, Streptococcus gordonii str. Challis substr. DL1, Streptococcus gordonii str. Challis substr. V288
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