Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SGO_0599 | SGO_0600 | SGO_0599 | SGO_0600 | Phosphoprotein phosphatase; Identified by match to protein family HMM PF00481. | Serine/threonine protein kinase; Identified by match to protein family HMM PF00069; match to protein family HMM PF03793. | 0.999 |
| SGO_0599 | SGO_1130 | SGO_0599 | SGO_1130 | Phosphoprotein phosphatase; Identified by match to protein family HMM PF00481. | Dihydrolipoamide dehydrogenase; Identified by match to protein family HMM PF00070; match to protein family HMM PF00364; match to protein family HMM PF01134; match to protein family HMM PF02852; match to protein family HMM PF07992; match to protein family HMM TIGR01350. | 0.955 |
| SGO_0599 | SGO_1132 | SGO_0599 | SGO_1132 | Phosphoprotein phosphatase; Identified by match to protein family HMM PF00481. | Acetoin dehydrogenase; Identified by match to protein family HMM PF02779; match to protein family HMM PF02780. | 0.637 |
| SGO_0599 | deoB | SGO_0599 | SGO_1264 | Phosphoprotein phosphatase; Identified by match to protein family HMM PF00481. | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | 0.670 |
| SGO_0599 | dnaJ | SGO_0599 | SGO_0404 | Phosphoprotein phosphatase; Identified by match to protein family HMM PF00481. | DnaJ chaparone protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.691 |
| SGO_0599 | fmt | SGO_0599 | SGO_0597 | Phosphoprotein phosphatase; Identified by match to protein family HMM PF00481. | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.944 |
| SGO_0599 | priA | SGO_0599 | SGO_0596 | Phosphoprotein phosphatase; Identified by match to protein family HMM PF00481. | Primosomal protein N'; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. | 0.831 |
| SGO_0599 | sun | SGO_0599 | SGO_0598 | Phosphoprotein phosphatase; Identified by match to protein family HMM PF00481. | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.971 |
| SGO_0599 | tig | SGO_0599 | SGO_0412 | Phosphoprotein phosphatase; Identified by match to protein family HMM PF00481. | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | 0.608 |
| SGO_0599 | tpiA | SGO_0599 | SGO_0762 | Phosphoprotein phosphatase; Identified by match to protein family HMM PF00481. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.594 |
| SGO_0600 | SGO_0599 | SGO_0600 | SGO_0599 | Serine/threonine protein kinase; Identified by match to protein family HMM PF00069; match to protein family HMM PF03793. | Phosphoprotein phosphatase; Identified by match to protein family HMM PF00481. | 0.999 |
| SGO_0600 | fmt | SGO_0600 | SGO_0597 | Serine/threonine protein kinase; Identified by match to protein family HMM PF00069; match to protein family HMM PF03793. | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.861 |
| SGO_0600 | priA | SGO_0600 | SGO_0596 | Serine/threonine protein kinase; Identified by match to protein family HMM PF00069; match to protein family HMM PF03793. | Primosomal protein N'; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. | 0.831 |
| SGO_0600 | sun | SGO_0600 | SGO_0598 | Serine/threonine protein kinase; Identified by match to protein family HMM PF00069; match to protein family HMM PF03793. | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.893 |
| SGO_1130 | SGO_0599 | SGO_1130 | SGO_0599 | Dihydrolipoamide dehydrogenase; Identified by match to protein family HMM PF00070; match to protein family HMM PF00364; match to protein family HMM PF01134; match to protein family HMM PF02852; match to protein family HMM PF07992; match to protein family HMM TIGR01350. | Phosphoprotein phosphatase; Identified by match to protein family HMM PF00481. | 0.955 |
| SGO_1130 | SGO_1132 | SGO_1130 | SGO_1132 | Dihydrolipoamide dehydrogenase; Identified by match to protein family HMM PF00070; match to protein family HMM PF00364; match to protein family HMM PF01134; match to protein family HMM PF02852; match to protein family HMM PF07992; match to protein family HMM TIGR01350. | Acetoin dehydrogenase; Identified by match to protein family HMM PF02779; match to protein family HMM PF02780. | 0.999 |
| SGO_1130 | dnaJ | SGO_1130 | SGO_0404 | Dihydrolipoamide dehydrogenase; Identified by match to protein family HMM PF00070; match to protein family HMM PF00364; match to protein family HMM PF01134; match to protein family HMM PF02852; match to protein family HMM PF07992; match to protein family HMM TIGR01350. | DnaJ chaparone protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.458 |
| SGO_1130 | tig | SGO_1130 | SGO_0412 | Dihydrolipoamide dehydrogenase; Identified by match to protein family HMM PF00070; match to protein family HMM PF00364; match to protein family HMM PF01134; match to protein family HMM PF02852; match to protein family HMM PF07992; match to protein family HMM TIGR01350. | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | 0.520 |
| SGO_1130 | tpiA | SGO_1130 | SGO_0762 | Dihydrolipoamide dehydrogenase; Identified by match to protein family HMM PF00070; match to protein family HMM PF00364; match to protein family HMM PF01134; match to protein family HMM PF02852; match to protein family HMM PF07992; match to protein family HMM TIGR01350. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.429 |
| SGO_1132 | SGO_0599 | SGO_1132 | SGO_0599 | Acetoin dehydrogenase; Identified by match to protein family HMM PF02779; match to protein family HMM PF02780. | Phosphoprotein phosphatase; Identified by match to protein family HMM PF00481. | 0.637 |
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