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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGO_0775Glycosyl transferase, group 1; Identified by match to protein family HMM PF00534. (437 aa)    
Predicted Functional Partners:
SGO_0774
Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534.
 
  
0.990
SGO_1389
Conserved hypothetical protein TIGR00147; Identified by match to protein family HMM PF00781; match to protein family HMM TIGR00147.
   
 
 0.902
gtfB
Conserved hypothetical protein; Required for polymorphic O-glycosylation of the serine-rich repeat protein in this bacteria. A stabilizing protein that is part of the accessory SecA2/SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. The GtfA-GtfB complex adds GlcNAc from UDP-GlcNAc to the substrate protein, attaching the first sugar residue. Stabilizes the glycosylation activity of GtfA. Has no N-acetylglucosaminyl transferase activity on its own.
   
 
 0.736
SGO_0776
Hypothetical protein; Identified by Glimmer2; putative.
       0.696
SGO_1377
Sulfatase; Identified by match to protein family HMM PF00884.
   
  
 0.639
rgp
Glycosyltransferase; Identified by match to protein family HMM PF00535.
  
  
 0.608
SGO_1019
Glycosyl transferase; Identified by match to protein family HMM PF00535.
   
  
 0.600
asp3
Accessory secretory protein.
   
 
 0.590
asp2
Accessory sescretory protein.
   
 
 0.587
SGO_0430
LPXTG cell wall surface protein; Identified by match to protein family HMM TIGR01167.
   
 
 0.574
Your Current Organism:
Streptococcus gordonii
NCBI taxonomy Id: 467705
Other names: S. gordonii str. Challis substr. CH1, Streptococcus gordonii ATCC 35105, Streptococcus gordonii str. Challis substr. CH1, Streptococcus gordonii str. Challis substr. DL1, Streptococcus gordonii str. Challis substr. V288
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