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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGO_0793Conserved hypothetical protein; Identified by match to protein family HMM PF03926; Belongs to the SprT family. (146 aa)    
Predicted Functional Partners:
SGO_0792
Conserved hypothetical protein; Identified by match to protein family HMM PF00575.
  
  
 0.822
SGO_1537
Conserved hypothetical protein; Involved in initiation control of chromosome replication. Belongs to the YabA family.
  
     0.677
SGO_0789
ABC transporter, substrate-binding protein; Identified by match to protein family HMM PF09323.
 
     0.675
SGO_0790
Predicted permease family; Identified by match to protein family HMM PF03773.
 
     0.635
SGO_0445
Identified by match to protein family HMM PF01926.
  
     0.576
SGO_0539
ABC transporter, permease protein; Identified by match to protein family HMM PF05975.
  
     0.574
SGO_0791
Conserved hypothetical protein.
       0.567
SGO_0588
Conserved hypothetical protein; Identified by match to protein family HMM PF06908; Belongs to the UPF0398 family.
  
     0.566
SGO_0652
Conserved hypothetical protein.
 
     0.544
DivIB
Cell division protein DivIB; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.
  
     0.529
Your Current Organism:
Streptococcus gordonii
NCBI taxonomy Id: 467705
Other names: S. gordonii str. Challis substr. CH1, Streptococcus gordonii ATCC 35105, Streptococcus gordonii str. Challis substr. CH1, Streptococcus gordonii str. Challis substr. DL1, Streptococcus gordonii str. Challis substr. V288
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.