STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGO_0803Hypothetical protein; Identified by Glimmer2; putative. (307 aa)    
Predicted Functional Partners:
SGO_0522
Acylphosphatase; Identified by match to protein family HMM PF00708.
      
 0.575
SGO_0524
HD domain protein; Identified by match to protein family HMM PF01966; match to protein family HMM TIGR00277.
      
 0.575
SGO_0703
Ferric transport regulator protein; Identified by match to protein family HMM PF01475; Belongs to the Fur family.
      
 0.575
ybeY
Conserved hypothetical protein TIGR00043; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
      
 0.575
dgkA
Diacylglycerol kinase (DAGK) (Diglyceride kinase)(DGK); Identified by match to protein family HMM PF01219.
      
 0.575
mscL
Large conductance mechanosensitive channel protein; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.
      
 0.575
SGO_1657
Identified by match to protein family HMM PF01594.
      
 0.575
amiD
Oligopeptide transport system permease protein; Identified by match to protein family HMM PF00528.
      
 0.575
mntH
Proton-dependent manganese transporter group C beta 2; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.
      
 0.574
hppA
Oligopeptide-binding lipoprotein; May be involved in the expression of cell surface properties important for colonization of the human oral cavity. It may also be involved in uptake processes; Belongs to the bacterial solute-binding protein 5 family.
      
 0.571
Your Current Organism:
Streptococcus gordonii
NCBI taxonomy Id: 467705
Other names: S. gordonii str. Challis substr. CH1, Streptococcus gordonii ATCC 35105, Streptococcus gordonii str. Challis substr. CH1, Streptococcus gordonii str. Challis substr. DL1, Streptococcus gordonii str. Challis substr. V288
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.