zmpC protein (Streptococcus gordonii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

zmpC

Zinc metalloproteinase C; Identified by match to protein family HMM PF04650; match to protein family HMM PF07501; match to protein family HMM PF07554; match to protein family HMM PF07580; match to protein family HMM PF07581; match to protein family HMM TIGR01168. (2597 aa)

Predicted Functional Partners:

SGO_0945

0.849

SGO_1598

0.714

SGO_1832

0.704

SGO_1852

0.635

sodA

0.632

SGO_1163

0.629

SGO_2009

0.628

SGO_1136

0.609

rpsB

0.592

tuf

0.577

Your Current Organism:

Streptococcus gordonii

NCBI taxonomy Id: 467705
Other names: S. gordonii str. Challis substr. CH1, Streptococcus gordonii ATCC 35105, Streptococcus gordonii str. Challis substr. CH1, Streptococcus gordonii str. Challis substr. DL1, Streptococcus gordonii str. Challis substr. V288

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SGO_0945	SGO_1598	SGO_0945	SGO_1598	ABC transporter permease protein; Identified by match to protein family HMM PF02687.	Conserved hypothetical protein.	0.710
SGO_0945	SGO_1832	SGO_0945	SGO_1832	ABC transporter permease protein; Identified by match to protein family HMM PF02687.	Conserved hypothetical protein.	0.637
SGO_0945	zmpC	SGO_0945	SGO_0942	ABC transporter permease protein; Identified by match to protein family HMM PF02687.	Zinc metalloproteinase C; Identified by match to protein family HMM PF04650; match to protein family HMM PF07501; match to protein family HMM PF07554; match to protein family HMM PF07580; match to protein family HMM PF07581; match to protein family HMM TIGR01168.	0.849
SGO_1136	zmpC	SGO_1136	SGO_0942	Putative esterase superfamily; Identified by match to protein family HMM PF00756.	Zinc metalloproteinase C; Identified by match to protein family HMM PF04650; match to protein family HMM PF07501; match to protein family HMM PF07554; match to protein family HMM PF07580; match to protein family HMM PF07581; match to protein family HMM TIGR01168.	0.609
SGO_1163	zmpC	SGO_1163	SGO_0942	Iron permease FTR1 family; Identified by match to protein family HMM PF03239.	Zinc metalloproteinase C; Identified by match to protein family HMM PF04650; match to protein family HMM PF07501; match to protein family HMM PF07554; match to protein family HMM PF07580; match to protein family HMM PF07581; match to protein family HMM TIGR01168.	0.629
SGO_1598	SGO_0945	SGO_1598	SGO_0945	Conserved hypothetical protein.	ABC transporter permease protein; Identified by match to protein family HMM PF02687.	0.710
SGO_1598	SGO_1832	SGO_1598	SGO_1832	Conserved hypothetical protein.	Conserved hypothetical protein.	0.641
SGO_1598	sodA	SGO_1598	SGO_1599	Conserved hypothetical protein.	Manganese-dependent superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.	0.585
SGO_1598	zmpC	SGO_1598	SGO_0942	Conserved hypothetical protein.	Zinc metalloproteinase C; Identified by match to protein family HMM PF04650; match to protein family HMM PF07501; match to protein family HMM PF07554; match to protein family HMM PF07580; match to protein family HMM PF07581; match to protein family HMM TIGR01168.	0.714
SGO_1832	SGO_0945	SGO_1832	SGO_0945	Conserved hypothetical protein.	ABC transporter permease protein; Identified by match to protein family HMM PF02687.	0.637
SGO_1832	SGO_1598	SGO_1832	SGO_1598	Conserved hypothetical protein.	Conserved hypothetical protein.	0.641
SGO_1832	zmpC	SGO_1832	SGO_0942	Conserved hypothetical protein.	Zinc metalloproteinase C; Identified by match to protein family HMM PF04650; match to protein family HMM PF07501; match to protein family HMM PF07554; match to protein family HMM PF07580; match to protein family HMM PF07581; match to protein family HMM TIGR01168.	0.704
SGO_1852	zmpC	SGO_1852	SGO_0942	Membrane-associated zinc metalloprotease, putative; Identified by match to protein family HMM PF02163; match to protein family HMM TIGR00054.	Zinc metalloproteinase C; Identified by match to protein family HMM PF04650; match to protein family HMM PF07501; match to protein family HMM PF07554; match to protein family HMM PF07580; match to protein family HMM PF07581; match to protein family HMM TIGR01168.	0.635
SGO_2009	zmpC	SGO_2009	SGO_0942	Zinc proteinase; Identified by match to protein family HMM PF04228.	Zinc metalloproteinase C; Identified by match to protein family HMM PF04650; match to protein family HMM PF07501; match to protein family HMM PF07554; match to protein family HMM PF07580; match to protein family HMM PF07581; match to protein family HMM TIGR01168.	0.628
rpsB	sodA	SGO_2001	SGO_1599	Ribosomal protein S2; Identified by match to protein family HMM PF00318; match to protein family HMM TIGR01011; Belongs to the universal ribosomal protein uS2 family.	Manganese-dependent superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.	0.855
rpsB	tuf	SGO_2001	SGO_0761	Ribosomal protein S2; Identified by match to protein family HMM PF00318; match to protein family HMM TIGR01011; Belongs to the universal ribosomal protein uS2 family.	Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.	0.997
rpsB	zmpC	SGO_2001	SGO_0942	Ribosomal protein S2; Identified by match to protein family HMM PF00318; match to protein family HMM TIGR01011; Belongs to the universal ribosomal protein uS2 family.	Zinc metalloproteinase C; Identified by match to protein family HMM PF04650; match to protein family HMM PF07501; match to protein family HMM PF07554; match to protein family HMM PF07580; match to protein family HMM PF07581; match to protein family HMM TIGR01168.	0.592
sodA	SGO_1598	SGO_1599	SGO_1598	Manganese-dependent superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.	Conserved hypothetical protein.	0.585
sodA	rpsB	SGO_1599	SGO_2001	Manganese-dependent superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.	Ribosomal protein S2; Identified by match to protein family HMM PF00318; match to protein family HMM TIGR01011; Belongs to the universal ribosomal protein uS2 family.	0.855
sodA	tuf	SGO_1599	SGO_0761	Manganese-dependent superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.	Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.	0.775

page 1 of 2

Server load: low (36%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About